Publikationsfonds der Universität Hohenheim

Permanent URI for this collectionhttps://hohpublica.uni-hohenheim.de/handle/123456789/16624

Über den Publikationsfonds der Universität Hohenheim erhalten Wissenschaftlerinnen und Wissenschaftler der Universität finanzielle Unterstützung bei der Veröffentlichung ihrer Forschungsergebnisse im Open Access. Gefördert werden Zeitschriftenartikel in Fully-Open-Access-Zeitschriften (Gold-OA) und hybriden Subskriptionszeitschriften (Hybrid-OA) sowie Monografien. Autorinnen und Autoren können online einen Förderantrag zur Finanzierungsbeteiligung ihrer Publikation stellen.

Publikationsfonds: https://kim.uni-hohenheim.de/publikationsfonds
Förderantrag: https://kim.uni-hohenheim.de/foerderantrag

Browse

Now showing 1 - 16 of 16

Antiviral defense systems in the rumen microbiome
(2025) Sáenz, Johan S.; Rios-Galicia, Bibiana; Seifert, Jana
The continuous interaction between phages and their respective hosts has resulted in the evolution of multiple bacterial immune mechanisms. However, the diversity and prevalence of antiviral defense systems in complex communities are still unknown. We therefore investigated the diversity and abundance of viral defense systems in 3,038 high-quality bacterial and archaeal genomes from the rumen. In total, 14,241 defense systems and 31,948 antiviral-related genes were identified. Those genes represented 114 unique system types grouped into 49 families. We observed a high prevalence of defense systems in the genomes. However, the number of defense systems, defense system families, and system density varied widely from genome to genome. Additionally, the number of defense system per genome correlated positively with the number of defense system families and the genome size. Restriction modification, Abi, and cas system families were the most common, but many rare systems were present in only 1% of the genomes. Antiviral defense systems are prevalent and diverse in the rumen, but only a few are dominant, indicating that most systems are rarely present. However, the collection of systems throughout the rumen may represent a pool of mechanisms that can be shared by different members of the community and modulate the phage–host interaction.
Chloride application enhances photosynthesis and facilitates nitrate translocation while driving chloride translocation into roots
(2025) Wei, Guanghui; Zhang, Xudong; Franzisky, Bastian L.; Geilfus, Christoph‐Martin; Zörb, Christian
Chloride and nitrate are essential mineral elements for crop growth. Due to their similar physical and electrochemical properties, their uptake and translocation interact antagonistically. This suggests that applying chloride to the leaf canopy during the late grain‐filling stage of cereals might enhance nitrate use efficiency. Hence, it remains uncertain whether foliar‐applied chloride at the late growth stage stimulates nitrate translocation from mature to younger leaves. To explore this possibility, two contrasting faba bean varieties were grown in a climate‐controlled chamber. Nitrate concentrations of approximately 50 and 93 μg mg FW −1 , respectively, were established in leaves by depleting nitrogen in the rooting medium. Based on these two nitrate concentrations in mature leaves, chloride was applied to the leaf canopy. Measurements of biomass, photosynthesis, and nitrate and chloride concentrations in both young and mature leaves revealed that chloride foliar application raised nitrate levels in younger leaves from 7.1 to 9.5 μmol g FW −1 and boosted photosynthesis by approximately 35%. However, one of the two faba bean varieties did not respond significantly to the chloride foliar application. These findings indicate that chloride application facilitates nitrate translocation from mature to younger leaves, potentially improving grain nitrogen supply. As a result, nitrate use efficiency might be increased by chloride application during late growth stages, although this effect is genotype‐dependent.
Data on transgenerational memory effects of photosynthetic efficiency of twelve wheat varieties under elevated carbon dioxide concentration and reduced soil water availability
(2025) Berauer, Bernd J.; Chaudhary, Suraj; Kottmann, Lorenz; Schweiger, Andreas H.
This data represents ACi curves of twelve winter wheat varieties, which were grown under elevated and ambient CO2 concentrations within a FACE experiment and the subsequent F1 generation was exposed to ambient and elevated CO2 concentrations in a highly controlled environment using climate chambers. The 12 winter wheat genotypes (Triticum aestivum L.) were selected based on their susceptibilty to leaf rust (Puccinia triticina Eriks.) and Fusarium head blight (Fusarium graminearum Schwabe) according to the descriptive variety list of the German Federal Office of Plant Varietes (Beschreibende Sortenliste, Bundessortenamt 2024). The aim was to obtain a diverse set of varieties with the widest possible range of susceptibilities to leaf rust and fusarium head blight. Photosynthesis was measured using the novel Dynamic Assimilation Technique, thus not with the common steady-state approach. The individual wheat plants were measured twice, once under saturating soil water availability (θFC) and once under reduced soil water availability (θcsoil). θcsoil represents the gravimetric water content when the soil matric potential drops below the root matric potential, thus the onset of plant drought stress (sensu Cai et al. [2]). The photosynthesis data was used to fit ACi curves and extract the maximum Rubisco carboxylation rate [Vcmax], maximum rate of electron transport [Jmax] and dark respiration [Rd]. At both measurements we determined BBCH and plant height to quantify plant morphological development, as well as leaf water potential to quantify plant ecohydrologic status. At the end of the experiment, biomass was harvested and reported. Further, we provide environmental data of the climate chambers in use. Within the data repository, we provide comprehensive experimental data on the investigation of transgenerational memory effects on photosynthetic efficiency. We provide photosynthetic raw data as well as processed (merged) and derived (extracted ACi fit) data. Additionally, we provide the R-code to reproduce the calculation of the derived parameters. Data on transgenerational memory effects (that is, the influence of the parental environment on offspring phenotype and performance) are scarce, i.e. on the adaptive capacity of the photosynthetic apparatus. Thus, the data provided here can contribute to closing this gap. The highly controlled environment allows to closely investigate cause-effect relationships, thereby contributing to a mechanistic understanding of the transgenerational memory effects on photosynthetic efficiency and how this is altered by reduced soil water availability. By using a recently developed methodological approach, the data contributes to further investigate the quality of the method and establish it within the field of plant ecophysiology.
Enhanced crop diversity but not smaller field size benefit bats in agricultural landscapes
(2025) Hiller, Thomas; Gall, Friederike; Grass, Ingo
Context: Farmland biodiversity continues to decline due to the expansion and intensification of agriculture. Historically, efforts to conserve farmland biodiversity have focused on conserving habitats outside agricultural production areas. More recently, attention has turned to the conservation potential of the cropland matrix, where reducing field size and increasing crop diversity to promote crop heterogeneity can significantly benefit farmland biodiversity. Bats are one group of farmland species that have experienced dramatic declines over recent decades. Objectives: Here we investigated the effects of crop heterogeneity (crop diversity, field size) and landscape structural elements (e.g. length of linear structures, distance to forest, proportion of semi-natural habitat) on the activity of bat functional groups. Results: Increasing crop diversity led to greater bat activity, especially for open space foraging bats. However, contrary expectations, bat activity was not affected by heterogeneity in crop configuration, i.e. field edge density. Furthermore, structural landscape elements, including hedgerows and distance to forest, were important predictors of bat activity, especially for species that hunt in highly cluttered spaces. While crop diversity clearly benefited bat activity, the lack of effect of crop configurational heterogeneity on bat foraging activity may suggest heterogeneityarea trade-offs and intensive pesticide use in small-scale vegetable production. Conclusions: Therefore, in addition to maintaining high levels of crop diversity, promoting hedgerows and tree lines between farmland and woodland may facilitate bat activity across the agricultural landscape matrix. The combination of high crop heterogeneity and structural elements provides favorable hunting grounds for bats and may promote their conservation in agricultural landscapes.
Insect conservation in agricultural landscapes needs both high crop heterogeneity and semi-natural habitats
(2024) Tassoni, Sara; Becker, David; Kasten, Marit Kinga; Moriníere, Jérôme; Grass, Ingo
Identifying landscapes that are suitable for both biodiversity conservation and agricultural production is a major challenge. Traditionally, much research has focused on biodiversity conservation outside of agricultural production areas, e.g., in semi-natural habitats. In contrast, recent research has mainly focused on the potential of crop heterogeneity. This includes both compositional (crop diversity) and configurational heterogeneity (field border density). However, if and how crop heterogeneity, and semi-natural habitats interact to shape insect diversity in agricultural landscapes remains poorly understood. Here we investigated the combined effects of crop diversity, field border density, and semi-natural habitats (i.e., grassland proportion, hedge density) on insect diversity. We sampled insect communities from 14 – 17 June 2021 with pan traps in 27 study landscapes (500 m x 500 m) covering independent gradients of these landscape variables and identified a total of 587 insect species with DNA metabarcoding. We found that field border density mediated the effects of crop diversity, grassland proportion, and hedge density on insect richness. At low levels of field border density (i.e., landscapes with mostly large fields), effects were either neutral (crop diversity), negative (grassland proportion) or weakly positive (hedge density). By contrast, at high levels of field border density, crop diversity, grassland proportion, and hedge density all exerted positive effects on insect richness. Responses to crop heterogeneity and semi-natural habitat differed among trophic groups of insects (decomposers, herbivores, parasitoids, predators). While variation in richness of herbivorous insects followed the patterns of the overall richness, decomposer richness was not related to any of the investigated variables. Predator richness increased with hedge density in landscapes, whereas parasitoid richness increased when high levels of field border density and grassland proportion coincided. Our study shows that increasing crop heterogeneity is a viable strategy for promoting insect diversity in agricultural landscapes. However, the effects of the amount of remaining semi-natural habitats, such as grassland or hedges, are mediated by configurational heterogeneity, and vary between trophic groups. Efforts to conserve insects in agricultural landscapes must therefore focus on both increasing the heterogeneity of the crop matrix by promoting crop diversity and increasing the density of field borders, while also maintaining or restoring semi-natural habitats as important source habitats for insect species.
Mating-type analysis in Diaporthe isolates from soybean in central Europe
(2025) Hosseini, Behnoush; Käfer, Lena Sophia; Link, Tobias Immanuel; Cai, Lei
Species of the genus Diaporthe have a mating-type system with the two mating types MAT1-1 and MAT1-2, like other ascomycetes. They can either be heterothallic, which means that any isolate only possesses one of the two mating types and needs a mating partner for sexual reproduction, or homothallic, which means that they possess both mating types and are self-fertile. For several Diaporthe species, no sexual reproduction has been observed so far. Using PCR with primers specific to the defining genes MAT1-1-1 and MAT1-2-1 , we determined the mating types of 33 isolates of Diaporthe caulivora , D. eres , D. longicolla , and D. novem from central Europe. In addition, we partially sequenced the mating-type genes of 25 isolates. We found that different D. longicolla isolates either possess MAT1-1-1 or MAT1-2-1, making the species heterothallic, which is in contrast to previous studies and the general assumption that D. longicolla only reproduces asexually. D. eres and D. novem were also found to be heterothallic. Using genomic sequence information and re-sequencing of DNA and RNA, we identified the MAT1-1-1 gene in D. caulivora and present here the full sequence of the mating-type locus of this homothallic species. Finally, we used sequence information from MAT1-1-1 and MAT1-2-1 , respectively, for improved phylogenetic resolution of our isolates.
Metabolome fingerprinting reveals the presence of multiple nitrification inhibitors in biomass and root exudates of Thinopyrum intermedium
(2024) Issifu, Sulemana; Acharya, Prashamsha; Schöne, Jochen; Kaur-Bhambra, Jasmeet; Gubry-Rangin, Cecile; Rasche, Frank
Biological Nitrification Inhibition (BNI) encompasses primarily NH4 +-induced release of secondary metabolites to impede the rhizospheric nitrifying microbes from per- forming nitrification. The intermediate wheatgrass Thinopyrum intermedium (Kernza®) is known for exuding several nitrification inhibition traits, but its BNI potential has not yet been identified. We hypothesized Kernza® to evince BNI potential through the presence and release of multiple BNI metabolites. The presence of BNI metabolites in the biomass of Kernza® and annual winter wheat (Triticum aestivum) and in the root exudates of hydroponically grown Kernza®, were fingerprinted using HPLC-DAD and GC–MS/MS analyses. Growth bioassays involving ammonia-oxidizing bacteria (AOB) and archaea (AOA) strains were conducted to assess the influence of the crude root metabolome of Kernza® and selected metabolites on nitrification. In most instances, significant concentrations of various metabolites with BNI potential were observed in the leaf and root biomass of Kernza® compared to annual winter wheat. Furthermore, NH4 + nutrition triggered the exudation of various phenolic BNI metabolites. Crude root exudates of Kernza® inhibited multiple AOB strains and completely inhibited N. viennensis. Vanillic acid, caffeic acid, vanillin, and phenylalanine suppressed the growth of all AOB and AOA strains tested, and reduced soil nitrification, while syringic acid and 2,6-dihydroxybenzoic acid were ineffective. We demonstrated the considerable role of the Kernza® metabolome in suppressing nitrification through active exudation of multiple nitrification inhibitors.
The non-nutritive sweetener rebaudioside a enhances phage infectivity
(2025) Marongiu, Luigi; Brzozowska, Ewa; Brykała, Jan; Burkard, Markus; Schmidt, Herbert; Szermer-Olearnik, Bożena; Venturelli, Sascha
Non-nutritive sweeteners (NNS) are widely employed in foodstuffs. However, it has become increasingly evident that their consumption is associated with bacterial dysbiosis, which, in turn, is linked to several health conditions, including a higher risk of type 2 diabetes and cancer. Among the NNS, stevia, whose main component is rebaudioside A (rebA), is gaining popularity in the organic food market segment. While the effect of NNS on bacteria has been established, the impact of these sweeteners on bacterial viruses (phages) has been neglected, even though phages are crucial elements in maintaining microbial eubiosis. The present study sought to provide a proof-of-concept of the impact of NNS on phage infectivity by assessing the binding of rebA to phage proteins involved in the infection process of enteropathogenic bacteria, namely the fiber protein gp17 of Yersinia enterocolitica phage φYeO3-12 and the tubular baseplate protein gp31 of Klebsiella pneumoniae phage 32. We employed docking analysis and a panel of in vitro confirmatory tests (microscale thermophoresis, RedStarch ™ depolymerization, adsorption, and lysis rates). Docking analysis indicated that NNS can bind to both fiber and baseplate proteins. Confirmatory assays demonstrated that rebA can bind gp31 and that such binding increased the protein’s enzymatic activity. Moreover, the binding of rebA to gp17 resulted in a decrease in the adsorption rate of the recombinant protein to its host but increased the Yersinia bacteriolysis caused by the whole phage compared to unexposed controls. These results support the hypothesis that NNS can impair phage infectivity, albeit the resulting effect on the microbiome remains to be elucidated.
Prostaglandin E2 signaling through prostaglandin E receptor subtype 2 and Nurr1 induces fibroblast growth factor 23 production
(2024) Feger, Martina; Hammerschmidt, Katharina; Liesche, lona; Rausch, Steffen; Alber, Jana; Föller, Michael
Bone cells produce fibroblast growth factor 23 (FGF23), a hormone regulating renal phosphate and vitamin D homeostasis, and a paracrine factor produced in further tissues. Chronic kidney disease and cardiovascular disorders are associated with early elevations of plasma FGF23 levels associated with clinical outcomes. FGF23 production is dependent on many conditions including inflammation. Prostaglandin E2 (PGE2) is a major eicosanoid with a broad role in pain, inflammation, and fever. Moreover, it regulates renal blood flow, renin secretion, natriuresis as well as bone formation through prostaglandin E receptor 2 (EP2). Here, we studied the role of PGE2 and its signaling for the production of FGF23. Osteoblast-like UMR-106 cells were exposed to EP receptor agonists, antagonists or RNAi. Wild type and EP2 knockout mice were treated with stable EP2 agonist misoprostol. Fgf23 or Nurr1 gene expression was determined by quantitative real-time PCR, hormone and further blood parameters by enzyme-linked immunosorbent assay and colorimetric methods. PGE2 and EP2 agonists misoprostol and butaprost enhanced FGF23 production in UMR-106 cells, effects mediated by EP2 and transcription factor Nurr1. A single dose of misoprostol up-regulated bone Fgf23 expression and FGF23 serum levels in wild type mice with subtle effects on parameters of mineral metabolism only. Compared to wild type mice, the FGF23 effect of misoprostol was significantly lower in EP2-deficient mice. To conclude, PGE2 signaling through EP2 and Nurr1 induces FGF23 production. Given the broad physiological and pathophysiological implications of PGE2 signaling, this effect is likely of clinical relevance.
Reactivation of the tRNASer/tRNATyr gene cluster in Arabidopsis thaliana root tips
(2025) Hummel, Guillaume; Kumari, Priyanka; Hua, Chenlei; Wang, Long; Mai, Yan-Xia; Wang, Nan; Shala, Negjmedin; Kaya, Emir Can; Molinier, Jean; Wang, Jia-Wei; Liu, Chang
Plants maintain redundant tRNA genes (tDNAs) in their nuclear genomes, but the significance, regulation, and functional roles of these genes remain poorly understood. A cluster of tandemly repeated tDNAs decoding serine and tyrosine (SYY cluster) is located on Arabidopsis (Arabidopsis thaliana) chromosome 1, intersecting constitutive heterochromatin and remaining transcriptionally silenced in most tissues. The natural conditions inducing their transcription remain unknown. Here, we elucidate the tissue-specific expression pattern of this cluster during seedling establishment. Our findings reveal that SYY cluster tRNAs are primarily produced in the root cap columella and adjacent root cap cells. Transcriptional reactivation of the SYY cluster occurs in these tissues despite high DNA methylation levels. Furthermore, we demonstrate that these cells accumulate high levels of a transgenic glycoprotein rich in serine, tyrosine, and proline, and that CRISPR/Cas9 deletion of the SYY cluster alters the accumulation and stability of the glycoprotein in these specific cells. Our work provides pioneering evidence of a developmental and cell-specific expression program for a plant tDNA. We offer insights into the putative role of specialized tDNAs in enhancing glycoprotein biosynthesis in protective tissues of the meristem.
Reduced body mass in a highly insectivorous mammal, the garden dormouse — ecological consequences of insect decline?
(2025) Erhardt, Stefanie; Förschler, Marc I.; Fietz, Joanna
Biodiversity is decreasing worldwide, and early indicators are needed to identify endangered populations before they start to decline in abundance. In mammals, body mass (BM) is regarded as an indicator of fitness, and its loss is used as an early warning signal preceding population decline. The garden dormouse ( Eliomys quercinus , Gliridae, BM: 60–110 g) is a small mammalian hibernator that has disappeared from over 50% of its former range in the last decades. The aim of this study was to investigate whether garden dormice from a presumably thriving and stable population already show early warning signals, which may precede a population decline. We therefore conducted capture‐mark‐recapture studies during 2003–2005 (Period 1) and 2018–2021 (Period 2) in the Northern Black Forest, one of its last natural distribution areas in Germany. We collected fecal samples, measured BM, and tibia length as a proxy for size and age. Results revealed that in Period 2 adult dormice had a significantly lower (12%) pre‐hibernation BM, corrected for body size, and juveniles showed a significantly lower BM gain after weaning than nearly two decades ago. Fecal samples collected in Period 2 showed that arthropods represented the main food residues in fecal samples during juvenile growth and pre‐hibernation fattening. Ambient temperature during hibernation showed no correlation with BM at emergence. We could not detect a phenological time shift in reproduction; however, we found only one birth peak in Period 2, compared with two birth peaks in Period 1. Observed changes in BM and reproduction pattern represent early warning signals, as they point to an insufficient availability of high‐quality food, which prevents dormice from meeting their nutritional requirements, with potentially serious consequences for their reproductive success and survival. As arthropods are the dominant food resource, their decline may at least partly explain this phenomenon.
The RNF/NQR redox pumps: a versatile system for energy transduction in bacteria and archaea
(2025) Buckel, Wolfgang; Ermler, Ulrich; Vonck, Janet; Fritz, Günter; Steuber, Julia
The Na + (or H + )-translocating ferredoxin:NAD + oxidoreductase (also called RNF, rhodobacter nitrogen fixation, complex) catalyzes the oxidation of reduced ferredoxin with NAD + , hereby generating an electrochemical gradient. In the reverse reaction driven by an electrochemical gradient, RNF provides reduced ferredoxin using NADH as electron donor. RNF plays a crucial role in the metabolism of many anaerobes, such as amino acid fermenters, acetogens, or aceticlastic methanogens. The Na + -translocating NADH:quinone oxidoreductase (NQR), which has evolved from an RNF, is found in selected bacterial groups including anaerobic, marine, or pathogenic organisms. Since NQR and RNF are not related to eukaryotic respiratory complex I (NADH:quinone oxidoreductase), members of this oxidoreductase family are promising targets for novel antibiotics. RNF and NQR share a membrane-bound core complex consisting of four subunits, which represent an essential functional module for redox-driven cation transport. Several recent 3D structures of RNF and NQR in different states put forward conformational coupling of electron transfer and Na + translocation reaction steps. Based on this common principle, putative reaction mechanisms of RNF and NQR redox pumps are compared. Key points: • Electrogenic ferredoxin:NAD + oxidoreductases (RNF complexes) are found in bacteria and archaea. • The Na + -translocating NADH:quinone oxidoreductase (NQR) is evolutionary related to RNF. • The mechanism of energy conversion by RNF/NQR complexes is based on conformational coupling of electron transfer and cation transport reactions.
Role of homovanillic acid esters in the regulation of skin inflammatory pathways and their effect on tight junction protein expression
(2025) Cervantes Recalde, Maria Fernanda; Bogensperger, Elena Zoe; Hans, Joachim; Stuhlmann, Dominik; Somoza, Veronika; Lieder, Barbara
In the context of epidermal inflammation, the inflammatory response not only involves the release of inflammatory cytokines like interleukin 8 (IL-8), but also modulation of tight junction protein expression levels. Previous studies showed that the tight junction protein claudin 1 (CLDN1) is upregulated during tumor necrosis factor α (TNFα)-induced inflammation by capsaicin in keratinocytes in a transient receptor potential channel vanilloid 1 (TRPV1)-dependent manner. However, the caveat with TRPV1 ligands is the undesired pain response elicited by the activation of neuronal TRPV1 channels. In this study, we hypothesized that also less or non-pungent homovanillic acid esters as structural analogs of capsaicin target CLDN1 upregulation during inflammation. Methods: We aimed to identify beneficial structural characteristics by selecting homovanillic acid esters with different aliphatic tail structures and screening them for CLDN1 upregulation at early stages of TNFα-induced inflammation in basal keratinocytes. Results: CLDN1 expression was upregulated independently of TRPV1 by compounds with a tail of 5 or 6 C-atoms, regardless of the presence of ramifications and double bonds with a maximum fold change of 2.05 ± 0.22 against control. The induction of CLDN1 expression was accompanied by increased expression of the differentiation marker involucrin (IVL). Discussion: The results suggest that the homovanillic ester-induced CLDN1 upregulation is a result of increased differentiation of the basal keratinocytes towards the keratinocyte morphology present in the stratum granulosum (SG), where tight junctions are formed. In conclusion, homovanillic acid esters with a 5 or 6 C-atom long aliphatic chain induced CLDN1 expression, thereby stimulating keratinocyte differentiation, independent from TRPV1 activation.
Saccharomyces boulardii CNCM I-745 supernatant improves markers of gut barrier function and inflammatory response in small intestinal organoids
(2025) Filipe Rosa, Louisa; Gonda, Steffen; Roese, Nadine; Bischoff, Stephan C.; Lachowicz-Wiśniewska, Sabina
Objectives: Saccharomyces boulardii CNCM I-745, a probiotic yeast, is effectively used for the treatment of acute diarrhea as well as for the prevention and treatment of traveller‘s diarrhea and diarrhea under tube feeding. The underlying mechanisms are not fully elucidated. Both antitoxic and regulatory effects on the intestinal barrier, mediated either by the yeast or yeast-derived substrates, have been discussed. Methods: To examine the effects of Saccharomyces boulardii released substrates (S.b.S) on gastrointestinal (GI) barrier function, a murine small intestinal organoid cell model under stress was used. Stress was induced by lipopolysaccharide (LPS) exposure or withdrawal of growth factors from cell culture medium (GFRed). Stressed organoids were treated with S.b.S (200 µg/mL), and markers of GI barrier and inflammatory response were assessed. Results: GFRed-induced stress was characterized by disturbances in selected tight junction (TJ) (p < 0.05), adherent junction (AJ) (p < 0.001), and mucin (Muc) formation (p < 0.01), measured by gene expressions, whereby additional S.b.S treatment was found to reverse these effects by increasing Muc2 (from 0.22 to 0.97-fold change, p < 0.05), Occludin (Ocln) (from 0.37 to 3.5-fold change, p < 0.0001), and Claudin (Cldn)7 expression (from 0.13 ± 0.066-fold change, p < 0.05) and by decreasing Muc1, Cldn2, Cldn5, and junctional adhesion molecule A (JAM-A) expression (all p < 0.01). Further, S.b.S normalized expression of nucleotide binding oligomerization domain (Nod)2- (from 44.5 to 0.51, p < 0.0001) and matrix metalloproteinase (Mmp)7-dependent activation (from 28.3 to 0.02875 ± 0.0044 ** p < 0.01) of antimicrobial peptide defense and reduced the expression of several inflammatory markers, such as myeloid differentiation primary response 88 (Myd88) (p < 0.01), tumor necrosis factor α (Tnfα) (p < 0.01), interleukin (IL)-6 (p < 0.01), and IL-1β (p < 0.001). Conclusions: Our data provide new insights into the molecular mechanisms by which Saccharomyces boulardii CNCM I-745-derived secretome attenuates inflammatory responses and restores GI barrier function in small intestinal organoids.
Tick hazard in a Central European country: Mapping Europe’s principal tick-borne disease vector across Germany
(2025) Springer, Andrea; Lindau, Alexander; Fachet-Lehmann, Katrin; Kämmer, Daniel; Bulling, Ingrid; Knoll, Steffen; Król, Nina; Fischer, Dominik; Fischer, Luisa; Drehmann, Marco; Chitimia-Dobler, Lidia; Noll, Madeleine; Vineer, Hannah Rose; Kahl, Olaf; Pfeffer, Martin; Strube, Christina; Mackenstedt, Ute
The most common European tick species, Ixodes ricinus, is the principal vector of Borrelia and tick-borne encephalitis virus and several other pathogens of public health relevance in Europe. Comprehensive data on tick abundance and the underlying ecological drivers are crucial for developing awareness and control strategies and to assess future changes in tick-borne disease risk. We aimed to provide a Germany-wide map of I. ricinus abundance to aid in disease transmission risk assessment. During 2018−2020, questing tick density was assessed at 83 sites across the whole country by drag flagging, whereby 49,344 I. ricinus nymphs and adults were collected. Relationships between climate, land cover, and monthly questing I. ricinus nymph density were explored and used to draw an abundance map. Highest tick hazard was observed in areas near the coast with mild winters and moist springs, and in mid-elevation mountain ranges, which represent popular tourist destinations. The ticks’ seasonal activity pattern was predominantly unimodal. The fact that the observed regional differences are contradictory to a previous estimation based on a combination of regional studies illustrates the need for an extensive and coordinated sampling effort to reliably estimate tick abundance at larger spatial scales. Combined with data on tick-borne pathogens, our study enables estimating the density of infected ticks and consequently the risk of acquiring an infectious tick bite. Moreover, the observed relationships with climate and land cover can help to predict future developments of tick hazard under different climate scenarios in Central Europe.
tsCRISPR based identification of Rab proteins required for the recycling of Drosophila TRPL ion channel
(2024) Zeger, Matthias; Stanisławczyk, Lena Sarah; Bulić,Marija; Binder, Andrea Maria; Huber, Armin
In polarized cells, the precise regulation of protein transport to and from the plasma membrane is crucial to maintain cellular function. Dysregulation of intracellular protein transport in neurons can lead to neurodegenerative diseases such as Retinitis Pigmentosa, Alzheimer’s and Parkinson’s disease. Here we used the light-dependent transport of the TRPL (transient receptor potential-like) ion channel in Drosophila photoreceptor cells to study the role of Rab proteins in TRPL recycling. TRPL is located in the rhabdomeric membrane of dark-adapted flies, but it is transported out of the rhabdomere upon light exposure and localizes at the Endoplasmatic Reticulum within 12 h. Upon subsequent dark adaptation, TRPL is recycled back to the rhabdomeric membrane within 90 min. To screen for Rab proteins involved in TRPL recycling, we established a tissue specific (ts) CRISPR/Cas9-mediated knock- out of individual Rab genes in Drosophila photoreceptors and assessed TRPL localization using an eGFP tagged TRPL protein in the intact eyes of these mutants. We observed severe TRPL recycling defects in the knockouts of Rab3, Rab4, Rab7, Rab32, and RabX2. Using immunohistochemistry, we further showed that Rab3 and RabX2 each play a significant role in TRPL recycling and also influence TRPL transport. We localized Rab3 to the late endosome in Drosophila photoreceptors and observed disruption of TRPL transport to the ER in Rab3 knock-out mutants. TRPL transport from the ER to the rhabdomere ensues from the trans-Golgi where RabX2 is located. We observed accumulated TRPL at the trans-Golgi in RabX2 knock-out mutants. In summary, our study reveals the requirement of specific Rab proteins for different steps of TRPL transport in photoreceptor cells and provides evidence for a unique retrograde recycling pathway of TRPL from the ER via the trans-Golgi

Browse

Browsing Publikationsfonds der Universität Hohenheim by Classification "570"